CDS

Accession Number TCMCG006C10370
gbkey CDS
Protein Id XP_022566270.1
Location complement(join(442289..442654,442732..442933,443009..443259,443339..443444,443528..443694,443762..443842,443905..444068,444142..444533,444642..444769,444866..444953,445030..445383,445461..445663))
Gene LOC106421230
GeneID 106421230
Organism Brassica napus

Protein

Length 833aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022710549.1
Definition 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3, chloroplastic-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category E
Description Cobalamin-independent synthase, Catalytic domain
KEGG_TC -
KEGG_Module M00017        [VIEW IN KEGG]
KEGG_Reaction R04405        [VIEW IN KEGG]
R09365        [VIEW IN KEGG]
KEGG_rclass RC00035        [VIEW IN KEGG]
RC00113        [VIEW IN KEGG]
RC01241        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00549        [VIEW IN KEGG]
EC 2.1.1.14        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00270        [VIEW IN KEGG]
ko00450        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00270        [VIEW IN KEGG]
map00450        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000096        [VIEW IN EMBL-EBI]
GO:0000097        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003871        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006555        [VIEW IN EMBL-EBI]
GO:0006790        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008172        [VIEW IN EMBL-EBI]
GO:0008652        [VIEW IN EMBL-EBI]
GO:0008705        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009066        [VIEW IN EMBL-EBI]
GO:0009067        [VIEW IN EMBL-EBI]
GO:0009086        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0042084        [VIEW IN EMBL-EBI]
GO:0042085        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044272        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0050667        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901605        [VIEW IN EMBL-EBI]
GO:1901607        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTCTCCTCCTTCCCCGGCGGAGACTGAACAGAAATAATAGGAGCAGTTTGAAGAAAGGGAAGACTATAAGAATGGGTCAGCGCGCTCTTCAGAGAGTCCCGCCGTCGCTTCCAAGCCGCACTCCATCTCTTCCACCACCGTCTTCCTCTTCCCCCTCCCTCCGTTGCGCACCCTCCTCTCGCCGCCCCCTCCGTCCCAGAGCAATGTCGTCCCACATTGTCGGTTATCCCCGCATCGGTCCCAAGAGAGAGCTTAAGTTTGCACTAGAGTCCTTCTGGGATGGGAAAACCGGTGCTGAGGATTTGCAAAACGTTGCTGCTGACCTCAGACGCTCCATATGGAAACATATGGCTGGTGTAGGGATCAAATACATTCCCAGCAACACTTTTTCTTACTATGATCAGATGTTGGACACCACAGCGATGCTTGGAGCTGTTCCCTCTAGGTACGGTTGGGAAAGTGGTGAGGTCGGGTTCGATGTTTACTTCTCCATGGCTAGGGGTAATGATTCTGTTCCTGCTATGGAAATGACCAAGTGGTTTGATACAAACTACCATTACATTGTTCCTGAGTTGGGTCCTTCTGTTAAATTCTCCTATGCATCTCACAAGGCTGTGGAGGAGTTTAAGGAAGCCAAAGCGCTTGGTATAGACACAGTTCCCGTGCTCATTGGTCCCATGACCTACTTGCTCCTCTCAAAACCAGCTAAGGATGTTGATAAATCTTTCTGCCTTCTTTCTCTGATTGACAAGATTCTTCCCGTCTACAAAGAAGTTTTGACTGATCTAAAGTCTGCTGGTGCACGTTGGATTCAGTTCGACGAGCCTATACTTGTGATGGATCTTGACACCAACCAGTTGCAGGCGTTTTCGGATGCCTACTCTCACATGGAGTCATCTTTGGCGGGGTTGAATGTTCTTATCGCCACATACTTCGCAGATGTTGCTGCTGAAGCGTACAAGGCATTGACGTCGTTGAAGTGTGTAACTGGGTTTGGATTTGACCTCGTTCGTGGATTAGAGACTCTTGATTTGATCAAAGTGGATTTTCCTCGTGGGAAGCTGCTATTTGCTGGAGTTGTTGACGGAAGAAACATTTGGGCCAATGATCTTTCTGCTTCGCTCAAGACACTACAGACTCTTGAAGACATTGTTGGGAAAGAAAAAGTTGTGGTCTCTACTTCGTGCTCTCTACTCCATACGGCTGTAGACTTGCTGAATGAAATTAAACTTGATAAAGAGCTAAAATCATGGCTTGCATTTGCGGCACAAAAGGTCGTTGAAGTGTATGCACTTGCCAGATCATTCTCTGGTGTTAAGGATGAGGCAATGTTTGCTTCTAATTCCATGCGACAAGCTTCTAGAAGATCATCTCCAAGGGTGACAAATGCCACTATACAACATAATGTTGCTGCAGTAATGAAATCTGATCATCGCCGTTCTACAAAAGTAAGTGCTAGGCTACAAGCCCAGCAGAAGAAGCTAAACCTTCCTCCTCTTCCAACAACGACAATTGGATCTTTTCCTCAGACAGCAGATCTCAGACGGATACGCAAGGAATTCAAGGCCAGAAAGATATCAGAAATTGATTATGTCCAGGCTGTCAAAGTCGAATTTGAAAAGGTAGTCAAGCTTCAGGAAGAACTTGGGATTGATGTATTGGTGCATGGGGAGGCAGAGAGAAACGATATGGTGGAGTTTTTTGGCGAGCAGCTGTCTGGCTTTGCATTCACATCGAATGGGTGGGTCCAGTCATATGGATCCCGCTGTGTCAAGCCACCTATCATCTACGGTGATGTCAGCCGACCAAAGGCAATGACTGTCTTCTGGTCGTCAATGGCACAGAAGATGACCGAACGTCCTATGAAGGGGATGCTCACTGGTCCTGTGACAATTCTCAATTGGTCCTTTGTTAGAAATGACCAGCCCAGGTATGAGACGTGTTTCCAAATTGCACTCGCGATTAAAGATGAGGTTAAGGACCTTGAGAAGGCTGGCATCACTGTTATCCAGATTGATGAAGCTGCATTAAGAGAAGGATTGCCTCTCAGGAGGTCCGAGCAAGAACTTTACCTTGACTGGGCCGTCCACGCATTCAGAATCACAAACTGTGATGTGCGAGACACTACTCAGATTCACACCCACATGTGCTACTCAAATTTCAACGACATTATCAACTCAATCATAAACATGGATGCTGATGTGATCACTATTGAAAACTCACGGTCAGATGAGAAGCTCTTATCAGTCTTCCATGAAGGAGTGAAATACGGTGCTGGAATCGGTCCAGGGGTGTATGACATTCACTCTCCTCGTATCCCATCATCTGAAGAAATAGCTGAGCGTATCAATAAGATGCTTGCAGTTCTGGACAGCAAAGTCCTTTGGGTGAACCCTGACTGTGGCCTAAAGACGCGGAAGTACTCTGAAGTTAAGTCTGCACTGAGCAACATGGTTGCTGCTACCAAGCTAATCCGCTCTCAGCTAAATAAGTCATAA
Protein:  
MSLLLPRRRLNRNNRSSLKKGKTIRMGQRALQRVPPSLPSRTPSLPPPSSSSPSLRCAPSSRRPLRPRAMSSHIVGYPRIGPKRELKFALESFWDGKTGAEDLQNVAADLRRSIWKHMAGVGIKYIPSNTFSYYDQMLDTTAMLGAVPSRYGWESGEVGFDVYFSMARGNDSVPAMEMTKWFDTNYHYIVPELGPSVKFSYASHKAVEEFKEAKALGIDTVPVLIGPMTYLLLSKPAKDVDKSFCLLSLIDKILPVYKEVLTDLKSAGARWIQFDEPILVMDLDTNQLQAFSDAYSHMESSLAGLNVLIATYFADVAAEAYKALTSLKCVTGFGFDLVRGLETLDLIKVDFPRGKLLFAGVVDGRNIWANDLSASLKTLQTLEDIVGKEKVVVSTSCSLLHTAVDLLNEIKLDKELKSWLAFAAQKVVEVYALARSFSGVKDEAMFASNSMRQASRRSSPRVTNATIQHNVAAVMKSDHRRSTKVSARLQAQQKKLNLPPLPTTTIGSFPQTADLRRIRKEFKARKISEIDYVQAVKVEFEKVVKLQEELGIDVLVHGEAERNDMVEFFGEQLSGFAFTSNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQKMTERPMKGMLTGPVTILNWSFVRNDQPRYETCFQIALAIKDEVKDLEKAGITVIQIDEAALREGLPLRRSEQELYLDWAVHAFRITNCDVRDTTQIHTHMCYSNFNDIINSIINMDADVITIENSRSDEKLLSVFHEGVKYGAGIGPGVYDIHSPRIPSSEEIAERINKMLAVLDSKVLWVNPDCGLKTRKYSEVKSALSNMVAATKLIRSQLNKS